BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016E10LP1|AL427029
(913 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1780 1695 0.0
>3x_Contig1780
Length = 27883
Score = 1695 bits (847), Expect = 0.0
Identities = 894/915 (97%), Gaps = 2/915 (0%)
Strand = Plus / Minus
Query: 1 gctgaattgcttccattcgctcaccaataacaacatcgttataatgatacatgacaccgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9678 gctgaattgcttccattcgctcaccaataacaacatcgttataatgatacatgacaccgt 9619
Query: 61 gattaatccacctgttcgtgtacggacacggacatcctcctctgttttaccaaaagcatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9618 gattaatccacctgttcgtgtacggacacggacatcctcctctgttttaccaaaagcatc 9559
Query: 121 gatggaaagtaacggcgatttcttcatcttgacaaatttgtgtagacagatacttgcgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9558 gatggaaagtaacggcgatttcttcatcttgacaaatttgtgtagacagatacttgcgtt 9499
Query: 181 asgaatttctccgtgagtggtgtagtatttccgtatcctaaacctattctattcctatga 240
| | |||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 9498 agcgaattctccgtgagtagtgtagtatttccgtatcctaaacctattctattcctatga 9439
Query: 241 gcatgtgtwattgtgaatgctagtatatgtcaaattggaattgattttgatattttttca 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9438 gcatgtgtaattgtgaatgctagtatatgtcaaattggaattgattttgatattttttca 9379
Query: 301 cttttgcctatattcaaaatcagattgagaagcaacctaacctgtaccaaatatacatga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9378 cttttgcctatattcaaaatcagattgagaagcaacctaacctgtaccaaatatacatga 9319
Query: 361 atactgacaactgtatatacacacactgaccattcggtgtgaggtccaatgtcaggttga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9318 atactgacaactgtatatacacacactgaccattcggtgtgaggtccaatgtcaggttga 9259
Query: 421 atagtagttgataaactgtragtttgattgatatatactgatttacatgttattatatwa 480
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 9258 atagtagttgataaactgtaagtttgattgatatatactgatttacatgttattatataa 9199
Query: 481 grttgagctttgattagcaataaragttgaataakattgcgttgatgcttcgtgttaacg 540
|| |||||||||||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct: 9198 aattaagctttgattagcaataaaagttgaataaaattgcgttgatgcttcgtgttaacg 9139
Query: 541 ttcatgaatcaggtaaacagagtatggtaaratrttgtgtgacatttgcagcaaggratg 600
|||||||||||||||||||||||||||||| || |||||||||||||||||||||| |||
Sbjct: 9138 ttcatgaatcaggtaaacagagtatggtaaaatattgtgtgacatttgcagcaaggaatg 9079
Query: 601 tgatttgrtccgatgcttaggaatcattgctttcattatatttctattattacatggtta 660
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9078 tgatttgatccgatgcttaggaatcattgctttcattatatttctattattacatggtta 9019
Query: 661 tgagaggctcagttaaagaaatggatggatcgcaaatataacaagtaacacaaagtatcc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9018 tgagaggctcagttaaagaaatggatggatcgcaaatataacaagtaacacaaagtatcc 8959
Query: 721 tcttgctcgcggctacatacgcagatttctttaccttataataaatctaacatacaagca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8958 tcttgctcgcggctacatacgcagatttctttaccttataataaatctaacatacaagca 8899
Query: 781 gattacctggcgtatgggtggtat-cacgtctatctctgcttccaccgccatacccatta 839
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 8898 gattacctggcgtatgggtggtatccacgtctatctctgcttccaccgccatacccatta 8839
Query: 840 ccaccacggcgggratcacgatcacggccaccacctccgcgatagtttgaagatgggcca 899
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8838 ccaccacggcgggaatcacgatcacggccaccacctccgcgatagtttgaagatgggcca 8779
Query: 900 -gacarctgtcacgg 913
|||| |||||||||
Sbjct: 8778 cgacagctgtcacgg 8764
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6163
Number of Sequences: 1807
Number of extensions: 6163
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 913
length of database: 10,358,551
effective HSP length: 16
effective length of query: 897
effective length of database: 10,329,639
effective search space: 9265686183
effective search space used: 9265686183
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.5 bits)